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Caci_8037 protein (Catenulispora acidiphila) - STRING interaction network
"Caci_8037" - PFAM: major facilitator superfamily MFS_1 in Catenulispora acidiphila
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_8037PFAM- major facilitator superfamily MFS_1; KEGG- bxe-Bxe_C1336 major facilitator superfamily multidrug efflux transporter (463 aa)    
Predicted Functional Partners:
Caci_5903
PFAM- major facilitator superfamily MFS_1; KEGG- fre-Franean1_4123 major facilitator transporter (487 aa)
   
          0.757
Caci_4127
PFAM- major facilitator superfamily MFS_1; KEGG- fre-Franean1_4123 major facilitator transporter (485 aa)
   
          0.743
Caci_0115
PFAM- major facilitator superfamily MFS_1; KEGG- rha-RHA1_ro10371 major facilitator superfamily multidrug resistance protein (554 aa)
   
          0.640
Caci_8036
PFAM- Stress responsive alpha-beta barrel domain protein; KEGG- sfu-Sfum_1221 stress responsive alpha-beta barrel domain protein (95 aa)
              0.593
Caci_3297
PFAM- major facilitator superfamily MFS_1; KEGG- rrs-RoseRS_3797 major facilitator transporter (477 aa)
   
          0.463
Caci_4580
PFAM- major facilitator superfamily MFS_1; KEGG- fre-Franean1_6965 major facilitator transporter (473 aa)
   
          0.436
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila DSM44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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