STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_0519PFAM: type II secretion system protein E; KEGG: cau:Caur_0512 type II secretion system protein E. (486 aa)    
Predicted Functional Partners:
Sthe_0518
PFAM: response regulator receiver; Cobyrinic acid ac-diamide synthase; SMART: response regulator receiver; KEGG: rca:Rcas_1683 response regulator receiver protein.
  
 0.991
Sthe_0520
PFAM: type II secretion system protein; KEGG: cau:Caur_0511 type II secretion system protein.
 
  
 0.990
Sthe_0521
PFAM: type II secretion system protein; KEGG: rrs:RoseRS_1276 type II secretion system protein.
 
  
 0.982
Sthe_0517
TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rca:Rcas_1684 SAF domain-containing protein.
 
  
 0.968
Sthe_0522
PFAM: protein of unknown function DUF192; KEGG: rrs:RoseRS_1277 hypothetical protein.
 
     0.898
Sthe_3201
PFAM: Protein of unknown function DUF2134, membrane; KEGG: mmb:Mmol_1398 hypothetical protein.
 
  
 0.881
Sthe_0121
PFAM: TadE family protein; KEGG: nth:Nther_2320 TadE family protein.
 
  
 0.835
Sthe_3199
PFAM: TadE family protein; KEGG: bpl:BURPS1106A_A2964 TadE-like protein.
 
  
 0.819
Sthe_3200
PFAM: TadE family protein; KEGG: sfu:Sfum_1495 TadE family protein.
 
  
 0.797
Sthe_0960
SMART: AAA ATPase; KEGG: hau:Haur_2506 AAA ATPase.
 
     0.708
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.