STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_1910KEGG: nca:Noca_4931 hypothetical protein. (240 aa)    
Predicted Functional Partners:
Sthe_0220
PFAM: protein of unknown function DUF1326; KEGG: rxy:Rxyl_0428 protein of unknown function DUF1326.
 
     0.810
Sthe_1341
PFAM: selenium-binding protein; KEGG: rde:RD1_2378 selenium binding protein.
 
     0.493
Sthe_2249
KEGG: pol:Bpro_3192 hypothetical protein.
  
     0.493
Sthe_1909
KEGG: fre:Franean1_0115 hypothetical protein.
       0.445
Sthe_3243
TIGRFAM: haloacid dehalogenase, type II; HAD- superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ade:Adeh_3811 haloacid dehalogenase, type II.
  
     0.436
Sthe_1911
Hypothetical protein.
       0.411
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.