STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_2035Contains selenocysteine; PFAM: DSBA oxidoreductase; KEGG: rxy:Rxyl_1822 DsbA oxidoreductase. (247 aa)    
Predicted Functional Partners:
Sthe_2034
PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase; KEGG: sth:STH2564 hypothetical protein.
 
  
 0.847
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.666
Sthe_0596
PFAM: response regulator receiver; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; HI0933 family protein; SMART: response regulator receiver; KEGG: gvi:glr0480 thioredoxin reductase carring response regulator receiver domain.
  
  
 0.613
Sthe_3517
Contains selenocysteine; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ank:AnaeK_1208 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
  
 0.543
Sthe_1246
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; Pyrrolo-quinoline quinone; SMART: serine/threonine protein kinase; tyrosine protein kinase; Pyrrolo-quinoline quinone; KEGG: cau:Caur_3817 protein kinase.
     
 0.497
Sthe_2768
PFAM: Chlorite dismutase; KEGG: dar:Daro_2580 chlorite dismutase.
  
     0.476
Sthe_0114
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rxy:Rxyl_1774 cytochrome c biogenesis protein, transmembrane region.
     
 0.433
Sthe_3170
KEGG: scl:sce6351 protein kinase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; tyrosine protein kinase; Serine/threonine protein kinase-related; GAF domain protein; SMART: GGDEF domain containing protein; serine/threonine protein kinase; tyrosine protein kinase; GAF domain protein.
     
 0.431
Sthe_0127
KEGG: rca:Rcas_3573 hypothetical protein.
  
 
 0.421
Sthe_2067
KEGG: rca:Rcas_3573 hypothetical protein.
  
 
 0.421
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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