STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_2322Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: hau:Haur_1099 ArsR family transcriptional regulator. (358 aa)    
Predicted Functional Partners:
Sthe_3513
KEGG: scl:sce0055 hypothetical protein.
  
     0.768
Sthe_0506
KEGG: hau:Haur_1454 hypothetical protein.
  
     0.764
Sthe_0921
KEGG: rrs:RoseRS_3193 hypothetical protein.
  
    0.757
Sthe_2100
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: hau:Haur_2733 VanW family protein.
  
     0.753
Sthe_0335
PFAM: SCP-like extracellular; KEGG: cau:Caur_3540 hypothetical protein.
  
     0.741
Sthe_0655
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_2811 tetratricopeptide TPR_2.
  
     0.727
Sthe_0469
Putative transmembrane anti-sigma factor; KEGG: rca:Rcas_0510 serine/threonine protein kinase.
  
     0.721
Sthe_0357
PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rca:Rcas_3535 hypothetical protein.
  
     0.691
Sthe_1693
KEGG: rrs:RoseRS_3712 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.683
Sthe_1975
KEGG: rrs:RoseRS_2654 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.664
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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