STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_2706PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reu:Reut_B5800 ABC transporter related. (273 aa)    
Predicted Functional Partners:
Sthe_2707
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eba:p2A122 putative taurine transport system permease protein.
  
 0.988
Sthe_1498
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fre:Franean1_3131 binding-protein-dependent transport systems inner membrane component.
  
 0.958
Sthe_1453
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_0816 binding-protein-dependent transport systems inner membrane component.
  
 0.946
Sthe_2708
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: eba:p2A128 ABC transporter substrate-binding protein.
 
  
 0.944
Sthe_3038
KEGG: glo:Glov_2014 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.898
Sthe_2709
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: eba:p2A128 ABC transporter substrate-binding protein.
 
  
 0.897
Sthe_1497
PFAM: NMT1/THI5 like domain protein; KEGG: fre:Franean1_3124 NMT1/THI5-like domain- containing protein.
 
  
 0.852
Sthe_3084
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.843
Sthe_1454
PFAM: NMT1/THI5 like domain protein; KEGG: rca:Rcas_2388 NMT1/THI5-like domain- containing protein.
 
  
 0.759
Sthe_2704
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_1362 ABC transporter related.
    
0.495
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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