STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_3508PFAM: GCN5-related N-acetyltransferase; KEGG: mfa:Mfla_1085 GCN5-related N- acetyltransferase (198 aa)    
Predicted Functional Partners:
ribA
GTP cyclohydrolase-2; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family
       0.591
Sthe_0327
PFAM: GCN5-related N-acetyltransferase; KEGG: sth:STH2420 putative acetyltransferase
 
   
 0.529
Sthe_3510
KEGG: xac:XAC3548 outer membrane protein
       0.491
Sthe_3020
PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_2918 ribosomal protein N- acetyltransferase
  
     0.405
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus DSM20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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