STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0259TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; KEGG: bpy:Bphyt_5681 rhamnose ABC transporter, periplasmic rhamnose-binding protein. (363 aa)    
Predicted Functional Partners:
Kfla_0258
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1037 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 0.996
Kfla_0257
PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_5683 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.995
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.982
Kfla_0260
PFAM: protein of unknown function DUF718; KEGG: kpe:KPK_5476 L-rhamnose 1-epimerase.
 
    0.919
Kfla_0261
TIGRFAM: L-rhamnose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: smd:Smed_0222 L-rhamnose catabolism isomerase.
 
     0.905
Kfla_0262
TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: class II aldolase/adducin family protein; KR domain protein; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: smd:Smed_0223 short chain dehydrogenase.
 
   
 0.900
Kfla_0263
Putative L-arabinose isomerase protein; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.834
Kfla_1775
PFAM: inner-membrane translocator; KEGG: mlo:mlr8216 ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.821
Kfla_0264
PFAM: carbohydrate kinase FGGY; KEGG: eca:ECA0440 rhamnulokinase.
 
  
 0.819
Kfla_5282
KEGG: bph:Bphy_4576 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: response regulator receiver; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SMART: response regulator receiver.
   
 
 0.798
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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