STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0391PFAM: Bifunctional DNA primase/polymerase; KEGG: mno:Mnod_4088 bifunctional DNA primase/polymerase. (290 aa)    
Predicted Functional Partners:
Kfla_0392
KEGG: pap:PSPA7_0362 hypothetical protein.
 
     0.870
Kfla_0394
PFAM: integrase family protein; KEGG: mlo:mlr0475 bacteriophage integrase; Belongs to the 'phage' integrase family.
 
   
 0.787
Kfla_0393
TIGRFAM: DNA binding domain protein, excisionase family.
       0.777
disA
Protein of unknown function DUF147; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP likely acts as a signaling molecule that may couple DNA integrity with a cellular process.
  
  
 0.768
Kfla_3343
PFAM: cell divisionFtsK/SpoIIIE.
 
  
 0.749
Kfla_5563
PFAM: cell divisionFtsK/SpoIIIE.
 
  
 0.747
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
   
  
 0.728
Kfla_0389
Hypothetical protein.
     
 0.726
Kfla_0390
Hypothetical protein; KEGG: bch:Bcen2424_6889 exonuclease, RNase T and DNA polymerase III.
     
 0.724
Kfla_5348
PFAM: UvrD/REP helicase; KEGG: pfo:Pfl01_5644 DNA-dependent helicase II; Belongs to the helicase family. UvrD subfamily.
  
  
 0.676
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.