STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_1000Hypothetical protein. (117 aa)    
Predicted Functional Partners:
Kfla_1321
PFAM: Phosphoesterase HXTX.
  
     0.652
Kfla_0999
Hypothetical protein; KEGG: YALI0F02387p.
       0.615
Kfla_1647
Hypothetical protein.
  
     0.571
Kfla_6408
Hypothetical protein.
  
     0.567
Kfla_0998
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rpi:Rpic_4848 transcriptional regulator, XRE family.
       0.562
Kfla_0410
Hypothetical protein.
  
     0.557
Kfla_1940
PFAM: dienelactone hydrolase; KEGG: rec:RHECIAT_CH0002741 hypothetical protein.
  
     0.520
Kfla_1650
Hypothetical protein; KEGG: mex:Mext_2482 putative pilus assembly protein CpaE.
  
     0.500
Kfla_4432
Hypothetical protein.
  
     0.480
Kfla_0996
TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mxa:MXAN_6341 glycine cleavage system T protein; Belongs to the GcvT family.
       0.466
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.