STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_1422PFAM: HpcH/HpaI aldolase; KEGG: rpi:Rpic_1954 2,4-dihydroxyhept-2-ene-1,7- dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family. (261 aa)    
Predicted Functional Partners:
Kfla_4233
PFAM: Aldehyde Dehydrogenase; KEGG: pcr:Pcryo_0821 aldehyde dehydrogenase.
  
 
 0.908
Kfla_6021
PFAM: Aldehyde Dehydrogenase; KEGG: scl:sce4495 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.908
Kfla_6525
PFAM: Aldehyde Dehydrogenase; KEGG: mes:Meso_4451 succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.908
Kfla_1421
Hypothetical protein.
       0.762
Kfla_1420
PFAM: aminoglycoside phosphotransferase; KEGG: bid:Bind_0167 aminoglycoside phosphotransferase.
       0.551
Kfla_2398
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: hypothetical protein.
 
  
 0.516
Kfla_4508
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: spl:Spea_3858 mandelate racemase/muconate lactonizing protein.
 
  
 0.494
Kfla_4968
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: hypothetical protein; K01706 glucarate dehydratase.
 
  
 0.473
Kfla_6634
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; KEGG: hypothetical protein.
  
 0.453
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.