STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_2189Hypothetical protein; KEGG: SNF2 family chromodomain-helicase. (491 aa)    
Predicted Functional Partners:
Kfla_2181
Hypothetical protein.
       0.773
Kfla_2182
Hypothetical protein.
       0.773
Kfla_2183
Hypothetical protein.
       0.773
Kfla_2184
Type IV secretory pathway VirD4 protein-like protein; KEGG: rle:pRL100217 putative conjugal transfer protein.
       0.773
Kfla_2185
KEGG: dps:DP0912 hypothetical protein.
       0.773
Kfla_2186
KEGG: mucin-associated surface protein (MASP).
       0.773
Kfla_2187
Hypothetical protein.
       0.773
Kfla_2188
Hypothetical protein.
       0.773
Kfla_2180
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: afw:Anae109_4226 DNA binding domain- containing protein.
       0.523
Kfla_2190
PFAM: TrwC relaxase; KEGG: mrd:Mrad2831_6351 conjugative relaxase domain- containing protein.
       0.425
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.