STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_2303TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: glo:Glov_0671 cell division protein FtsW; Belongs to the SEDS family. (389 aa)    
Predicted Functional Partners:
Kfla_2302
KEGG: bbr:BB4526 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain.
 
 0.994
Kfla_0061
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; KEGG: pca:Pcar_1046 cell division protein FtsI.
 
 0.982
Kfla_2300
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
  
 0.977
Kfla_2299
TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: afw:Anae109_0117 cell shape determining protein MreB.
 
 
 0.969
Kfla_2301
TIGRFAM: rod shape-determining protein MreD.
 
  
 0.957
Kfla_2880
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: mxa:MXAN_5610 putative penicillin-binding protein.
 
 0.947
murC
UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
  
 0.886
murD
UDP-N-acetylmuramoylalanine/D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
 0.885
Kfla_6892
PFAM: penicillin-binding protein transpeptidase; KEGG: mxa:MXAN_7139 putative penicillin-binding protein.
 
 
 0.866
mraY-2
phospho-N-acetylmuramoyl-pentapeptide-transferas e; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.844
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.