STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3359KEGG: bme:BMEII0970 membrane protein NosY precursor. (268 aa)    
Predicted Functional Partners:
Kfla_3361
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cak:Caul_1642 ABC transporter related.
 
     0.929
Kfla_3360
PFAM: SNARE associated Golgi protein; KEGG: bte:BTH_I1321 hypothetical protein.
       0.773
Kfla_2337
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein.
  
     0.669
Kfla_0573
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein.
  
     0.645
Kfla_1960
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein.
  
     0.617
Kfla_4491
Hypothetical protein.
 
   0.483
Kfla_3363
PFAM: histidine triad (HIT) protein; KEGG: afw:Anae109_2290 histidine triad (HIT) protein.
       0.475
thrS
TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: gur:Gura_2628 threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.468
Kfla_5875
Hypothetical protein.
 
   0.454
Kfla_3736
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sfu:Sfum_1404 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
   
 0.411
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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