STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_4219Catalase; PFAM: manganese containing catalase; KEGG: mes:Meso_1876 manganese containing catalase. (293 aa)    
Predicted Functional Partners:
Kfla_4220
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
       0.741
Kfla_5825
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.724
Kfla_4483
PFAM: Radical SAM domain protein; KEGG: mex:Mext_2717 radical SAM domain-containing protein.
  
     0.608
Kfla_6518
KEGG: avn:Avin_17490 hypothetical protein.
 
     0.575
Kfla_4218
PFAM: CinA domain protein; KEGG: dvm:DvMF_0903 CinA domain protein; Belongs to the CinA family.
  
    0.543
Kfla_5021
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: aav:Aave_4017 alcohol dehydrogenase.
 
     0.531
Kfla_1210
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: aav:Aave_4523 superoxide dismutase.
   
 
  0.519
Kfla_5020
KEGG: aav:Aave_4018 hypothetical protein.
  
     0.471
Kfla_1951
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: mrd:Mrad2831_6246 alcohol dehydrogenase.
 
     0.469
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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