STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_4237PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: scl:sce1535 alcohol dehydrogenase. (317 aa)    
Predicted Functional Partners:
Kfla_4235
KEGG: pat:Patl_3870 hypothetical protein.
 
     0.843
Kfla_4236
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: scl:sce8899 DNA-binding protein.
 
     0.803
Kfla_3149
PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: pst:PSPTO_5231 oxidoreductase, zinc-binding.
  
     0.581
Kfla_4238
Hypothetical protein.
       0.572
Kfla_4234
TIGRFAM: M6 family metalloprotease domain protein; KEGG: hypothetical protein.
       0.483
Kfla_2231
PFAM: MaoC domain protein dehydratase; KEGG: aav:Aave_3913 dehydratase.
 
 
 
 0.461
Kfla_6335
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta- ketoacyl synthase; Acyl transferase; Luciferase-like monooxygenase; phosphopantetheine-binding; condensation domain protein; KEGG: rso:RS05860 peptide synthetase protein.
  
 
 0.422
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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