STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_4734PFAM: aminotransferase class-III; KEGG: hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (429 aa)    
Predicted Functional Partners:
Kfla_6021
PFAM: Aldehyde Dehydrogenase; KEGG: scl:sce4495 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.952
Kfla_1726
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: scl:sce6400 hypothetical protein.
 
 
 0.950
Kfla_1695
TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bpy:Bphyt_3917 methylmalonate-semialdehyde dehydrogenase.
 
 0.949
Kfla_4233
PFAM: Aldehyde Dehydrogenase; KEGG: pcr:Pcryo_0821 aldehyde dehydrogenase.
 
 0.934
Kfla_1385
PFAM: Aldehyde Dehydrogenase; KEGG: scl:sce5007 putative aldehyde dehydrogenase (NAD(+)); Belongs to the aldehyde dehydrogenase family.
 
 0.930
Kfla_6525
PFAM: Aldehyde Dehydrogenase; KEGG: mes:Meso_4451 succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.930
Kfla_3181
PFAM: Pyridoxal-dependent decarboxylase; KEGG: csa:Csal_1055 pyridoxal-dependent decarboxylase.
 
 
 0.925
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
 0.918
Kfla_4019
PFAM: Pyridoxal-dependent decarboxylase; KEGG: glutamate decarboxylase and related PLP- dependent proteins.
 
 
 0.912
panC
Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.906
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.