STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_5265PFAM: glycoside hydrolase family 16; Ricin B lectin; SMART: Ricin B lectin; KEGG: mxa:MXAN_6550 glycosy hydrolase family protein. (430 aa)    
Predicted Functional Partners:
Kfla_0552
PFAM: cellulose-binding family II; Fibronectin type III domain protein; SMART: cellulose-binding family II; Fibronectin type III domain protein; KEGG: azc:AZC_2901 type III fibronectin.
   
 0.943
Kfla_5081
Chitinase; PFAM: glycoside hydrolase family 19; Carbohydrate- binding family V/XII; KEGG: mxa:MXAN_4534 chitinase, class I.
 
     0.907
Kfla_4769
PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: mxa:MXAN_5466 S1E family peptidase.
 
     0.817
Kfla_5574
Glucan endo-1,3-beta-D-glucosidase; KEGG: hypothetical protein.
   
 0.814
Kfla_4018
PFAM: peptidase alpha-lytic pro domain; peptidase S1 and S6 chymotrypsin/Hap; Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII; KEGG: mxa:MXAN_5466 S1E family peptidase.
 
     0.766
Kfla_2464
PFAM: coagulation factor 5/8 type domain protein; KEGG: saz:Sama_3637 hypothetical protein.
   
 0.727
Kfla_4947
Chitinase; KEGG: cja:CJA_2611 endo-chitinase, putative, chi18D; PFAM: glycoside hydrolase family 18; SMART: chitinase II; Belongs to the glycosyl hydrolase 18 family.
  
    0.617
Kfla_4274
PFAM: PKD domain containing protein; Carbohydrate binding family 6; SMART: PKD domain containing protein; cellulose binding type IV; KEGG: sde:Sde_0722 Crp/FNR family transcriptional regulator.
     0.582
Kfla_4693
PFAM: glycoside hydrolase family 3 domain protein; KEGG: Os03g0749300; hypothetical protein; Belongs to the glycosyl hydrolase 3 family.
  
 0.574
Kfla_6337
PFAM: glycoside hydrolase family 3 domain protein; Carbohydrate binding family 11; SMART: Na-Ca exchanger/integrin-beta4; KEGG: Os03g0749300; hypothetical protein; Belongs to the glycosyl hydrolase 3 family.
  
 0.570
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.