STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_5813KEGG: pol:Bpro_3192 hypothetical protein. (90 aa)    
Predicted Functional Partners:
Kfla_5815
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: pol:Bpro_3193 transcriptional regulator, LuxR family.
 
     0.655
Kfla_5651
PFAM: Tetratricopeptide TPR_4; KEGG: pzu:PHZ_c1273 adenylate cyclase.
  
     0.616
Kfla_2107
PFAM: transcriptional activator domain; Tetratricopeptide TPR_4; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bpy:Bphyt_5099 ATP-dependent transcriptional regulator, MalT-like, LuxR family.
  
     0.541
Kfla_5814
PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE2035 putative membrane transport protein.
       0.493
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.