STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6206PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_3575 major facilitator transporter. (500 aa)    
Predicted Functional Partners:
Kfla_6205
PFAM: regulatory protein TetR; KEGG: mxa:MXAN_1727 TetR family transcriptional regulator.
 
     0.831
Kfla_6204
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dvl:Dvul_0456 MarR family transcriptional regulator.
       0.594
Kfla_6203
PFAM: Luciferase-like monooxygenase; KEGG: bcj:BCAM0937 putative monooxygenase, luciferase-like.
       0.432
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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