STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_0202Conserved hypothetical protein; KEGG: sfu:Sfum_1830 CoA enzyme activase. (381 aa)    
Predicted Functional Partners:
Elen_0203
Conserved hypothetical protein; KEGG: dal:Dalk_4850 CoA-substrate-specific enzyme activase.
   
 0.989
Elen_0201
TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: gur:Gura_1539 putative CoA-substrate-specific enzyme activase.
   
 0.975
Elen_0345
TIGRFAM: prevent-host-death family protein; KEGG: gur:Gura_1262 prevent-host-death family protein.
  
     0.543
Elen_0199
TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: yen:YE1929 hypothetical protein.
       0.465
Elen_0200
TIGRFAM: prevent-host-death family protein.
       0.465
Elen_1685
TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: ccv:CCV52592_0874 (R)-2-hydroxyglutaryl-CoA dehydratase activator (2-hydroxyglutaryl-CoA dehydratase component A).
   
 0.409
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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