STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_0408Transcriptional regulator, MarR family; PFAM: regulatory protein LysR; LysR substrate- binding; regulatory protein MarR; KEGG: rme:Rmet_1546 transcriptional regulator, LysR family. (307 aa)    
Predicted Functional Partners:
Elen_0686
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: bam:Bamb_6272 LysR family transcriptional regulator.
  
     0.554
Elen_0510
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: reu:Reut_C6430 LysR family transcriptional regulator.
  
     0.464
Elen_0410
Hypothetical protein; KEGG: reh:H16_B0336 transcriptional regulator, LysR- family.
 
    
0.462
Elen_0409
KEGG: azo:azo2395 phenylacetate--CoA ligase.
       0.435
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.