STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_0740KEGG: aba:Acid345_1830 secretion protein HlyD. (309 aa)    
Predicted Functional Partners:
Elen_0742
PFAM: protein of unknown function DUF214; KEGG: dal:Dalk_4858 protein of unknown function DUF214.
 
 
 0.970
Elen_0741
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vvy:VVA1496 peptide ABC transporter ATPase.
 
 
 0.929
Elen_1025
PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_4201 putative macrolide efflux ABC transporter, permease protein.
 
 
 0.874
Elen_2177
PFAM: protein of unknown function DUF214; KEGG: hha:Hhal_1917 protein of unknown function DUF214.
  
 
 0.849
Elen_1024
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_7937 ABC transporter related.
 
 
 0.747
Elen_0399
PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: glo:Glov_3629 ABC transporter related; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
 
 0.730
Elen_1023
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: swi:Swit_2151 RND family efflux transporter MFP subunit.
  
     0.725
Elen_0739
Hypothetical protein.
       0.618
Elen_1418
PFAM: protein of unknown function DUF214; KEGG: bcb:BCB4264_A4949 ABC transporter permease protein.
  
 
 0.617
Elen_1535
PFAM: protein of unknown function DUF214; KEGG: gur:Gura_1658 hypothetical protein.
  
 
 0.617
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.