STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_2078PFAM: periplasmic binding protein; KEGG: bca:BCE_4450 iron compound ABC transporter, iron compound-binding protein. (335 aa)    
Predicted Functional Partners:
Elen_2077
PFAM: transport system permease protein; KEGG: bha:BH3291 ferrichrome ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.990
Elen_2076
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vpa:VPA1652 iron-dicitrate transporter ATP- binding subunit.
 
 
 0.986
Elen_1121
PFAM: transport system permease protein; KEGG: mpo:Mpop_4300 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.955
Elen_1120
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_01054 iron(III) dicitrate transport ATP-binding protein.
 
 
 0.860
Elen_2069
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: dal:Dalk_4009 uroporphyrin-III C- methyltransferase.
     
 0.493
Elen_2079
PFAM: Radical SAM domain protein; KEGG: sfu:Sfum_3058 radical SAM domain protein.
     
 0.472
Elen_2029
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bca:BCE_1438 iron compound ABC transporter, permease protein, putative.
   
  
 0.465
Elen_2177
PFAM: protein of unknown function DUF214; KEGG: hha:Hhal_1917 protein of unknown function DUF214.
  
  
 0.433
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.