STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99679.1D-aminopeptidase dipeptide-binding protein DppA. (589 aa)    
Predicted Functional Partners:
AKI99678.1
Putative diheme cytochrome c-553.
       0.741
AKJ04383.1
D-aminopeptidase.
 
   
 0.644
AKJ03009.1
D-aminopeptidase.
 
   
 0.632
AKJ01363.1
Beta-peptidyl aminopeptidase.
 
   
 0.625
AKJ01110.1
Peptide ABC transporter, ATP-binding protein.
  
  
 0.556
AKJ01565.1
Muramoyltetrapeptide carboxypeptidase.
 
    0.520
AKJ00452.1
Dipeptide transport system permease protein DppB.
 
  
 0.457
AKI99677.1
Putative fatty acid hydroxylase.
       0.455
AKI99680.1
PPE family protein.
       0.448
AKJ01742.1
Oligopeptide transport system permease protein OppC.
 
  
 0.420
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.