STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00195.1Type IV fimbrial assembly, ATPase PilB. (287 aa)    
Predicted Functional Partners:
AKJ00954.1
General secretion pathway protein F.
 
 
 0.882
AKJ06663.1
Type IV fimbrial assembly protein PilC.
 
 
 0.878
AKJ05719.1
General secretion pathway protein F.
 
 
 0.854
AKJ02669.1
Type IV fimbrial assembly, ATPase PilB.
  
     0.771
AKJ02851.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
     0.770
AKJ06656.1
Leader peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.720
AKJ06653.1
Type IV pilus biogenesis protein PilM.
 
 
 
 0.716
AKJ06664.1
Twitching motility protein PilT.
 
  
 0.715
AKJ01723.1
Twitching motility protein PilT.
 
  
 0.711
AKJ05211.1
Response regulator.
 
     0.711
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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