STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00399.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (329 aa)    
Predicted Functional Partners:
AKJ00398.1
Permeases of the major facilitator superfamily.
 
     0.732
AKI99656.1
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.694
AKI99428.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.672
AKJ05190.1
Cyn operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.668
AKJ06190.1
Chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
  
     0.666
AKJ03760.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.650
AKJ05649.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.638
AKJ02864.1
Cyn operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.612
AKI99302.1
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.600
AKJ00397.1
Hypothetical protein.
       0.526
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.