STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00425.1Hypothetical protein. (385 aa)    
Predicted Functional Partners:
AKJ00426.1
Glyoxalase family protein.
 
     0.935
AKJ00427.1
Ferredoxin, 2Fe-2S.
 
    0.908
AKJ00428.1
Salicylate hydroxylase.
 
     0.902
AKJ00424.1
Nodulation protein D; Belongs to the LysR transcriptional regulatory family.
 
     0.857
AKJ00422.1
Metal-dependent hydrolase.
 
     0.784
AKJ00423.1
Fumarylacetoacetate hydrolase family protein.
 
     0.651
AKJ07304.1
Fumarylacetoacetate hydrolase family protein.
 
     0.513
AKJ04618.1
Fumarylacetoacetase.
 
     0.418
AKJ04633.1
Secreted oxidoreductase.
 
     0.418
AKJ00429.1
Putative ATP-dependent DNA helicase.
       0.408
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.