STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01278.1Ferric siderophore transport system, periplasmic binding protein TonB. (253 aa)    
Predicted Functional Partners:
AKJ01279.1
Hypothetical protein.
 
 
 0.911
AKJ01277.1
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.889
AKJ01134.1
Trehalose synthase.
 
 
 0.851
AKJ04787.1
Trehalose synthase.
 
 
 0.851
AKJ07994.1
Trehalose synthase.
 
 
 0.851
AKJ06239.1
Trehalose synthase.
 
 
 0.850
AKJ01276.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.840
AKI99361.1
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.839
AKJ01275.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.833
AKI99359.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.785
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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