STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01279.1Hypothetical protein. (1045 aa)    
Predicted Functional Partners:
AKJ01278.1
Ferric siderophore transport system, periplasmic binding protein TonB.
 
 
 0.911
AKJ04850.1
Ferric siderophore transport system, periplasmic binding protein TonB.
 
 
 0.831
AKJ07549.1
Hypothetical protein.
  
    0.757
AKJ02042.1
RTX toxin.
  
     0.756
AKJ04075.1
Hypothetical protein.
  
    0.755
AKJ06332.1
TonB family protein.
 
 
 0.750
AKI99287.1
Hypothetical protein.
  
     0.739
AKI99817.1
Hypothetical protein.
  
     0.737
AKI99949.1
Hypothetical protein.
  
     0.731
AKJ03212.1
TonB family protein.
 
 
 0.719
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (12%) [HD]