STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01342.1D-aminoacylase. (591 aa)    
Predicted Functional Partners:
AKJ06586.1
Hypothetical protein.
  
   
 0.597
AKI99725.1
Phosphoserine phosphatase.
  
     0.559
AKJ02425.1
Hypothetical protein.
  
     0.554
AKJ01341.1
Cell division inhibitor.
       0.513
AKJ01343.1
Hypothetical protein.
       0.512
AKJ04790.1
Putative ferredoxin.
  
     0.488
AKJ01344.1
Sensory box histidine kinase.
       0.460
AKJ04622.1
Transcriptional regulator, TetR family.
  
     0.419
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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