STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01570.1Capsular polysaccharide synthesis enzyme CpsC, polysaccharide export. (203 aa)    
Predicted Functional Partners:
AKJ00488.1
Capsular exopolysaccharide family protein.
 
 
 0.997
AKJ05132.1
Capsular polysaccharide biosynthesis protein.
 
  
 0.967
AKJ04660.1
Tyrosine-protein kinase wzc.
 
 
 0.910
AKJ04659.1
Tyrosine-protein kinase EpsD.
 
 
 0.837
AKJ04658.1
Capsular polysaccharide biosynthesis protein.
 
  
 0.828
AKJ02718.1
Teichoic acid export ATP-binding protein TagH.
  
  
 0.772
AKJ02717.1
O-antigen export system permease protein RfbD.
  
  
 0.768
AKJ01571.1
Hypothetical protein.
       0.765
AKJ03599.1
Lipid carrier UDP-N-acetylgalactosaminyltransferase.
 
  
 0.764
AKJ06905.1
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.758
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.