STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02098.1High-affnity carbon uptake protein Hat/HatR. (1192 aa)    
Predicted Functional Partners:
AKJ02097.1
High-affnity carbon uptake protein Hat/HatR.
 
     0.926
AKJ02673.1
WD-repeat protein.
  
     0.775
AKJ00725.1
Kinesin light chain-like protein.
  
 
  0.742
AKJ00818.1
Kinesin light chain-like protein.
  
 
  0.738
AKJ06284.1
TPR repeat protein.
  
 
  0.738
AKJ05293.1
Hypothetical protein.
  
     0.702
AKJ06639.1
Heterocyst differentiation protein.
  
     0.695
AKI99006.1
TPR repeat protein.
  
 
  0.679
AKJ03747.1
Heterocyst differentiation protein.
  
     0.675
AKJ01185.1
DNA recombination protein RmuC.
  
 
  0.671
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (28%) [HD]