STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02193.1Putative membrane protein. (501 aa)    
Predicted Functional Partners:
AKJ02194.1
Hypothetical protein.
 
     0.811
AKJ05153.1
Putative lipoprotein.
  
     0.730
AKJ05539.1
Putative lipoprotein.
  
     0.719
AKJ04709.1
Putative lipoprotein.
  
     0.674
AKJ04970.1
Putative lipoprotein.
  
     0.655
AKJ02914.1
Hypothetical protein.
  
    0.628
AKJ04299.1
TPR domain protein, putative component of TonB system.
  
     0.612
AKJ00951.1
Ser/Thr and Tyr protein phosphatase.
  
     0.611
AKJ05323.1
Polyhydroxyalkanoic acid synthase.
  
     0.605
AKJ04016.1
Hypothetical protein.
  
     0.600
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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