STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02208.1Acyl dehydratase. (147 aa)    
Predicted Functional Partners:
AKJ03488.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.576
AKI99035.1
Hypothetical protein.
   
 0.574
AKJ06596.1
Catalase; Belongs to the catalase family.
   
 0.574
AKJ02207.1
Hypothetical protein.
       0.525
AKJ00772.1
Probably aromatic ring hydroxylating enzyme.
  
  
 0.522
birA
Biotin-protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.521
AKJ01874.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.516
AKJ02048.1
Enoyl-CoA hydratase.
  
 0.516
AKJ05402.1
Enoyl-CoA hydratase.
  
 0.516
AKJ01428.1
Long-chain-fatty-acid CoA ligase.
  
  
 0.500
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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