STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02211.1Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase. (472 aa)    
Predicted Functional Partners:
AKJ03017.1
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase.
 
 
 0.848
AKI98454.1
Periplasmic thiol:disulfide interchange protein DsbA.
  
 
 0.670
AKJ02278.1
Periplasmic thiol:disulfide interchange protein DsbA.
  
 
 0.670
AKJ04714.1
Periplasmic thiol:disulfide interchange protein DsbA.
  
 
 0.670
AKJ06211.1
Thioredoxin family protein.
 
 
 0.643
AKJ01568.1
Thioredoxin family protein.
  
 
 0.590
AKI98591.1
Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family.
  
 
 0.481
msrA
Peptide methionine sulfoxide reductase MsrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 
 
 0.476
AKJ02210.1
AmpG permease.
       0.462
rsfS
Iojap protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
  
    0.461
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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