STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02215.1High-affnity carbon uptake protein Hat/HatR. (1151 aa)    
Predicted Functional Partners:
AKJ02768.1
Serine/threonine kinase.
  
     0.725
AKJ02853.1
Extensin-like protein precursor.
  
     0.725
AKJ03626.1
Serine/Threonine protein kinase.
  
     0.713
AKJ00667.1
Serine/threonine protein kinase.
 
 
   0.696
AKI98728.1
Serine/threonine protein kinase.
  
     0.688
AKJ02673.1
WD-repeat protein.
  
     0.685
AKJ01845.1
Serine/threonine protein kinase.
  
     0.669
AKJ02913.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
 0.636
AKJ00058.1
WD domain G-beta repeat protein.
  
     0.629
AKJ01921.1
Hypothetical protein.
  
     0.584
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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