STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02225.1Radical SAM domain heme biosynthesis protein. (239 aa)    
Predicted Functional Partners:
AKJ02226.1
Hypothetical protein.
 
  
 0.923
AKJ04436.1
Hypothetical protein.
 
  
 0.837
AKJ00951.1
Ser/Thr and Tyr protein phosphatase.
  
     0.756
AKJ07382.1
Exonuclease SbcC.
  
     0.755
AKJ02914.1
Hypothetical protein.
  
     0.749
AKJ02846.1
Flagellar motor protein.
  
     0.746
AKJ06930.1
Hypothetical protein.
  
     0.741
AKJ00466.1
RTX toxin.
  
     0.738
AKJ06738.1
Hypothetical protein.
  
     0.724
AKJ01243.1
Hypothetical protein.
  
     0.718
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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