STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02239.1Hypothetical protein. (136 aa)    
Predicted Functional Partners:
AKJ02238.1
Hypothetical protein.
  
  
 0.824
AKJ00072.1
Hypothetical protein.
  
  
 0.776
AKJ02240.1
Hypothetical protein.
  
  
 0.772
AKJ02242.1
Hypothetical protein.
  
  
 0.766
AKJ02237.1
Hypothetical protein.
  
  
 0.757
AKJ02241.1
IcmF-related protein.
  
  
 0.712
AKJ02233.1
Hypothetical protein.
  
  
 0.692
AKJ02243.1
Hypothetical protein.
  
  
 0.686
AKJ04098.1
Hypothetical protein.
  
  
 0.621
AKJ02236.1
Putative cytoplasmic protein USSDB7A.
  
  
 0.616
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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