STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02303.1Hypothetical protein. (328 aa)    
Predicted Functional Partners:
AKJ02304.1
Hypothetical protein.
  
    0.475
AKJ06987.1
Hydroxyacylglutathione hydrolase.
  
    0.472
AKI98437.1
Zn-dependent hydrolase.
  
    0.466
AKI98968.1
Hypothetical protein.
  
    0.466
AKI99195.1
Hydroxyacylglutathione hydrolase.
  
    0.466
AKI99973.1
Zn-dependent hydrolase.
  
    0.466
AKJ03445.1
Hypothetical protein.
  
    0.466
AKJ05735.1
Hypothetical protein.
  
    0.466
AKJ06078.1
Hypothetical protein.
  
    0.466
AKJ06219.1
Metallo-beta-lactamase precursor.
  
    0.466
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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