STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02324.1Hypothetical protein. (193 aa)    
Predicted Functional Partners:
AKJ02325.1
Hypothetical protein.
       0.727
AKJ04296.1
Putative abductin-like protein.
  
     0.648
AKJ01574.1
Putative abductin-like protein.
  
     0.640
AKJ02326.1
Putative protein with NUDIX domain protein; Belongs to the Nudix hydrolase family.
       0.583
AKJ04361.1
Putative serine protein kinase, PrkA.
  
     0.580
AKJ03653.1
HAD superfamily.
  
     0.558
AKJ05036.1
Adventurous gliding motility protein S.
  
     0.502
AKJ01577.1
TPR domain protein, putative component of TonB system.
  
     0.489
AKJ05725.1
General secretion pathway protein J.
  
     0.462
AKJ07298.1
Vitamin K epoxide reductase family/thioredoxin domain protein.
  
     0.459
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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