STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (526 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
 0.999
hutH
Histidine ammonia-lyase.
 
 0.999
AKI99020.1
tolB protein precursor protein.
  
  
 0.672
AKI99251.1
Putative Xaa-Pro dipeptidase.
  
  
 0.651
AKJ00251.1
Amidohydrolase precursor.
  
  
 0.651
AKJ01016.1
Hypothetical protein.
  
  
 0.651
AKJ02384.1
Xaa-Pro dipeptidase.
  
  
 0.651
AKJ02639.1
Amidohydrolase.
  
  
 0.651
AKJ08020.1
Amidohydrolase precursor.
  
  
 0.651
AKJ08278.1
Agmatinase; Belongs to the arginase family.
 
  
 0.616
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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