STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03292.1Hypothetical protein. (771 aa)    
Predicted Functional Partners:
AKJ03620.1
Hypothetical protein.
  
     0.724
AKJ03291.1
OmpA domain protein.
   
   0.695
AKJ00800.1
Hypothetical protein.
  
     0.617
AKJ02121.1
Putative glutathionylspermidine synthase.
  
     0.584
AKJ00330.1
Hypothetical protein.
  
     0.575
AKJ02122.1
Hypothetical protein.
  
     0.541
AKJ05395.1
Nickel transporter UreH.
  
     0.518
AKJ01320.1
Hypothetical protein.
 
     0.512
AKJ01507.1
Phospholipase C 4 precursor.
  
     0.506
AKJ00760.1
Hypothetical protein.
  
     0.503
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.