STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03344.1UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (308 aa)    
Predicted Functional Partners:
AKJ03347.1
UDP-galactopyranose mutase.
 
  
 0.985
AKJ03349.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.945
AKJ06124.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
 0.936
AKJ00513.1
UDP-glucose 6-dehydrogenase.
  
 
 0.934
AKJ03377.1
UDP-glucose 4-epimerase.
 
0.920
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.914
AKJ01601.1
UDP-glucose 4-epimerase.
  
 0.912
AKJ01663.1
UDP-glucose 4-epimerase.
  
 0.912
AKJ03157.1
UDP-glucose 4-epimerase.
  
 0.912
AKJ03346.1
dTDP-4-dehydrorhamnose reductase; Belongs to the glycosyl hydrolase 1 family.
     
 0.810
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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