STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03570.1Microcystin dependent protein. (167 aa)    
Predicted Functional Partners:
AKJ03568.1
Acetyltransferase, GNAT family.
 
     0.802
AKJ06303.1
Aspartyl/asparaginyl beta-hydroxylase.
 
     0.714
AKJ03569.1
Phage tail fiber protein.
 
     0.596
AKJ06025.1
RTX toxin.
 
  
 0.593
AKJ06221.1
Fibronectin type III domain protein.
   
   0.520
AKJ07728.1
Hypothetical protein.
  
     0.517
AKI99669.1
Lysine-epsilon oxidase.
  
     0.443
AKJ06585.1
Non-ribosomal peptide synthetase.
  
     0.441
AKJ04307.1
Membrane protein.
  
     0.440
AKJ07542.1
Hypothetical protein.
 
 
   0.436
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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