STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03584.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
AKJ03190.1
DNA gyrase subunit A.
  
     0.563
AKJ00359.1
Hypothetical protein.
  
     0.511
AKJ07333.1
Trypsin domain protein; Belongs to the peptidase S1B family.
  
     0.506
AKJ03583.1
Endo-1,4-beta-xylanase A precursor.
       0.504
AKJ04474.1
Negative regulator of beta-lactamase expression.
  
     0.481
AKJ05370.1
Hypothetical protein.
  
     0.465
AKI99050.1
Trehalose-6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.463
AKJ00859.1
Alpha,alpha-trehalose-phosphate synthase.
   
    0.463
AKI99524.1
Negative regulator of beta-lactamase expression.
  
     0.458
AKJ02116.1
Negative regulator of beta-lactamase expression.
  
     0.442
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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