STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03604.1Hypothetical protein. (148 aa)    
Predicted Functional Partners:
AKJ03605.1
Oxidoreductase.
 
    0.869
AKJ04075.1
Hypothetical protein.
  
     0.673
AKJ07549.1
Hypothetical protein.
  
     0.654
AKJ08071.1
Secreted hydrolase.
  
     0.645
AKJ00817.1
Putative serine/threonine-protein kinase pknL.
  
     0.625
AKJ03603.1
Transcriptional regulator, AraC family protein.
 
     0.624
AKJ02333.1
Peptidase C14, caspase catalytic subunit p20.
  
     0.614
AKJ01134.1
Trehalose synthase.
  
     0.593
AKJ00679.1
Germacradienol/germacrene D synthase.
  
     0.592
AKI99287.1
Hypothetical protein.
  
     0.590
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.