STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03648.1GAF domain/GGDEF domain protein. (722 aa)    
Predicted Functional Partners:
AKJ05845.1
EAL domain protein.
  
 0.906
AKJ02656.1
Response regulator.
  
 0.871
AKJ04601.1
Response regulator.
  
 0.844
AKJ06267.1
HAMP domain/HD domain protein.
 
 0.831
AKJ07938.1
Hypothetical protein.
 
 
 0.823
AKJ03647.1
Cell division protein DivIC; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
       0.778
AKJ03649.1
Protein-L-isoD(D-D) O-methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA.
       0.773
AKJ05211.1
Response regulator.
 
  
 0.711
AKJ04325.1
Glutamate synthase [NADPH] large chain.
 
 
 0.706
AKJ07210.1
Adenylate cyclase.
 
 
 0.684
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.