STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03649.1Protein-L-isoD(D-D) O-methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. (262 aa)    
Predicted Functional Partners:
AKJ03647.1
Cell division protein DivIC; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
       0.773
AKJ03648.1
GAF domain/GGDEF domain protein.
       0.773
miaA
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
      0.608
AKJ03650.1
Hypothetical protein.
       0.572
AKJ03417.1
Succinate dehydrogenase iron-sulfur protein.
  
     0.554
AKJ03646.1
Hypothetical protein.
       0.518
AKJ03416.1
Succinate dehydrogenase flavoprotein subunit.
  
     0.515
AKJ01702.1
Hypothetical protein.
  
     0.449
AKJ04411.1
Radical SAM domain protein.
  
     0.443
AKJ00631.1
Succinate dehydrogenase cytochrome b558 subunit.
  
     0.439
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.