STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03686.1Zinc protease. (470 aa)    
Predicted Functional Partners:
AKJ03685.1
Peptidase M16 domain protein.
  
0.990
AKJ00111.1
Zinc protease.
  
0.958
AKI98847.1
Protease, insulinase family/protease, insulinase family.
  
0.955
AKJ06202.1
Peptidase, M16 family.
  
0.954
AKJ03687.1
Ribosomal large subunit pseudouridine synthase D.
   
   0.811
AKJ01451.1
FAD dependent oxidoreductase.
   
 0.694
AKI98548.1
Iron-sulfur cluster-binding protein, Rieske family.
   
 0.688
AKI99454.1
Hypothetical protein.
   
 0.688
AKJ07617.1
Rieske.
   
 0.688
AKJ00643.1
NADH-ubiquinone oxidoreductase chain F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 
 0.660
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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